Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EUU25_08955 | A0QYL8 | + | 1912930 - 1914273 | 47577.2 |
| coce/nond family hydrolase | EUU25_08960 | Q9L9D7 | + | 1914301 - 1916196 | 67949.5 |
| nitroreductase family protein | EUU25_08965 | F4KU78 | - | 1916262 - 1916936 | 25335.2 |
| aspartate/tyrosine/aromatic aminotransferase | EUU25_08970 | Q02636 | - | 1917206 - 1918387 | 42757.2 |
| maleylacetoacetate isomerase | EUU25_08975 | O86043 | - | 1918493 - 1919128 | 23151.7 |
| fumarylacetoacetase | EUU25_08980 | A5PKH3 | - | 1919125 - 1920423 | 46915.5 |
| voc family protein | EUU25_08985 | P47233 | - | 1920420 - 1920968 | 20594.2 |
| 4-hydroxyphenylpyruvate dioxygenase | EUU25_08990 | P80064 | - | 1920968 - 1922083 | 41183.6 |
| lrp/asnc family transcriptional regulator | EUU25_08995 | P37424 | + | 1922241 - 1922711 | 17385.1 |
| alpa family phage regulatory protein | EUU25_09000 | P12552 | - | 1923066 - 1923323 | 9679.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.