Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EUU25_08805 | Q9X248 | - | 1878554 - 1879267 | 24446.6 |
| sdr family oxidoreductase | EUU25_08810 | Q988B7 | - | 1879264 - 1880034 | 27043.6 |
| gntr family transcriptional regulator | EUU25_08815 | Q8GAL4 | - | 1880034 - 1880789 | 27901.1 |
| lysr family transcriptional regulator | EUU25_08820 | P07774 | - | 1881051 - 1881632 | 21482.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EUU25_08825 | Q5ZXE0 | - | 1883091 - 1883597 | 18294.6 |
| fad-dependent oxidoreductase | EUU25_08830 | A0R4S9 | - | 1883678 - 1885438 | 62906.5 |
| ethd family reductase | EUU25_08835 | Not Available | + | 1885575 - 1885925 | 13151.7 |
| hypothetical protein | EUU25_08840 | Not Available | - | 1885950 - 1886912 | 34814.9 |
| prolyl aminopeptidase | EUU25_08845 | Q87DF8 | - | 1886909 - 1887904 | 36791.2 |
| act domain-containing protein | EUU25_08850 | Not Available | - | 1888070 - 1888462 | 13600.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.