Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta family protein | EUU25_08705 | O87388 | - | 1855105 - 1856358 | 45106.9 |
| nad(p)/fad-dependent oxidoreductase | EUU25_08710 | Q3MHH6 | - | 1856355 - 1857992 | 58416.2 |
| mfs transporter | EUU25_08715 | P0AE25 | + | 1858025 - 1859176 | 39163.6 |
| succinylglutamate-semialdehyde dehydrogenase | EUU25_08720 | Q9A7W2 | + | 1859423 - 1860865 | 51417.1 |
| n-succinylarginine dihydrolase | EUU25_08725 | A5V3M9 | + | 1860813 - 1862147 | 48125.1 |
| arginine n-succinyltransferase | EUU25_08730 | P80358 | + | 1862149 - 1863072 | 34115.5 |
| hypothetical protein | EUU25_08735 | Not Available | - | 1863315 - 1864457 | 44087.4 |
| hypothetical protein | EUU25_08740 | E1XUJ2 | - | 1864454 - 1865605 | 44146.0 |
| cupin domain-containing protein | EUU25_08745 | Q7X284 | - | 1865857 - 1866954 | 41024.7 |
| maleylacetoacetate isomerase | EUU25_08750 | O86043 | - | 1866977 - 1867624 | 24184.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.