Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | EUU25_08355 | P64017 | - | 1765301 - 1766098 | 27803.8 |
| pentachlorophenol monooxygenase | EUU25_08360 | B1MM05 | - | 1766208 - 1767512 | 47394.9 |
| glutathione s-transferase family protein | EUU25_08365 | Q03425 | - | 1767509 - 1768429 | 35276.5 |
| thioesterase family protein | EUU25_08370 | Not Available | - | 1768475 - 1769272 | 29112.9 |
| tetr/acrr family transcriptional regulator | EUU25_08375 | P0ACT8 | - | 1769346 - 1769936 | 22363.6 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_08380 | A0A1L5BU05 | - | 1770170 - 1771004 | 29041.8 |
| hypothetical protein | EUU25_08385 | I6YCF5 | - | 1771028 - 1772005 | 34655.5 |
| acyl-coa dehydrogenase | EUU25_08390 | I6Y3V5 | - | 1772019 - 1773158 | 41839.4 |
| nitronate monooxygenase | EUU25_08395 | Q9I4V0 | + | 1773363 - 1774343 | 34703.0 |
| acetyl-coa c-acyltransferase | EUU25_08400 | O53871 | + | 1774363 - 1775616 | 44474.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.