Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | EUU25_08255 | Q1GSP2 | + | 1743346 - 1743963 | 22207.5 |
| aminoacyl-trna hydrolase | EUU25_08260 | Q1GSP1 | + | 1744024 - 1744593 | 20934.3 |
| topology modulation protein | EUU25_08265 | Q4ZZE4 | + | 1744598 - 1745095 | 19238.5 |
| sdr family oxidoreductase | EUU25_08270 | Q8A945 | + | 1745147 - 1746142 | 34945.3 |
| hypothetical protein | EUU25_08275 | Not Available | - | 1746149 - 1746406 | 9369.33 |
| redox-regulated atpase ychf | EUU25_08280 | P44681 | + | 1746474 - 1747574 | 39311.8 |
| globin | EUU25_08285 | Not Available | + | 1747627 - 1748055 | 15777.9 |
| hypothetical protein | EUU25_08290 | Not Available | + | 1748077 - 1748403 | 11325.0 |
| hypothetical protein | EUU25_08295 | Not Available | + | 1748448 - 1749725 | 46608.7 |
| dna mismatch repair endonuclease mutl | EUU25_08300 | Q1GSN3 | - | 1749743 - 1751557 | 65334.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.