Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_08105 | Not Available | - | 1714188 - 1714595 | 14393.1 |
| mipa/ompv family protein | EUU25_08110 | Q9AB80 | - | 1714663 - 1715541 | 30476.5 |
| duf2141 domain-containing protein | EUU25_08115 | Not Available | - | 1715620 - 1716099 | 16695.2 |
| fatty acid hydroxylase family protein | EUU25_08120 | O88822 | - | 1716005 - 1716754 | 28635.9 |
| mbl fold metallo-hydrolase | EUU25_08125 | A0QDL1 | - | 1716775 - 1717836 | 37509.1 |
| para family protein | EUU25_08130 | Q9K5N0 | - | 1717860 - 1718609 | 27319.6 |
| lycopene cyclase | EUU25_08135 | Q01331 | + | 1718731 - 1719882 | 43119.0 |
| phytoene desaturase | EUU25_08140 | P54978 | + | 1719879 - 1721360 | 54443.2 |
| tigr00730 family rossman fold protein | EUU25_08145 | P48636 | + | 1721360 - 1721941 | 20575.1 |
| phytoene/squalene synthase family protein | EUU25_08150 | P22872 | + | 1721938 - 1722867 | 34497.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.