Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EUU25_08005 | A0R665 | - | 1697268 - 1698782 | 56559.4 |
| alkylphosphonate utilization protein | EUU25_08010 | P0AFJ3 | + | 1698894 - 1699199 | 10986.0 |
| doxx family membrane protein | EUU25_08015 | Not Available | + | 1699196 - 1699603 | 14732.3 |
| cold-shock protein | EUU25_08020 | Q01761 | - | 1699882 - 1700091 | 7274.39 |
| hemerythrin domain-containing protein | EUU25_08025 | P9WL58 | - | 1700291 - 1700767 | 17942.7 |
| voc family protein | EUU25_08030 | Not Available | - | 1700830 - 1701210 | 13902.5 |
| lipocalin | EUU25_08035 | Q08790 | + | 1701620 - 1702180 | 20398.4 |
| type 1 glutamine amidotransferase domain-containing protein | EUU25_08040 | Q5AF03 | + | 1702289 - 1702966 | 23754.7 |
| hypothetical protein | EUU25_08045 | Not Available | - | 1703003 - 1703293 | 10379.7 |
| hypothetical protein | EUU25_08050 | Not Available | - | 1703424 - 1703822 | 14414.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.