Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1 subunit epsilon | EUU25_07905 | Q2G5N4 | + | 1678453 - 1678719 | 9420.3 |
| duf1772 domain-containing protein | EUU25_07910 | Not Available | + | 1678961 - 1679395 | 15443.8 |
| hypothetical protein | EUU25_07915 | Not Available | - | 1679457 - 1679888 | 16441.7 |
| dmt family transporter | EUU25_07920 | Q1RKL2 | - | 1679925 - 1680806 | 30622.6 |
| cpaf family protein | EUU25_07925 | P9WMT2 | + | 1680975 - 1682528 | 56689.6 |
| carbon-nitrogen hydrolase family protein | EUU25_07930 | Q94JV5 | - | 1682778 - 1683608 | 30052.8 |
| hypothetical protein | EUU25_07935 | Not Available | + | 1683836 - 1684078 | 7413.97 |
| udp-glucose 4-epimerase gale | EUU25_07940 | Q59083 | + | 1684201 - 1685202 | 36284.0 |
| atp-dependent protease subunit hslv | EUU25_07945 | A5VEJ8 | + | 1685250 - 1685816 | 20402.4 |
| atp-dependent protease atpase subunit hslu | EUU25_07950 | C0RFW7 | + | 1685841 - 1687142 | 47997.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.