Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EUU25_07755 | Q2RN61 | + | 1647900 - 1648526 | 22197.2 |
| coproporphyrinogen iii oxidase | EUU25_07760 | Q5SUV1 | + | 1648523 - 1649683 | 41965.5 |
| tyrosine recombinase xerc | EUU25_07765 | Q8UC70 | + | 1649698 - 1650591 | 32357.9 |
| deda family protein | EUU25_07770 | Q48630 | - | 1650621 - 1651217 | 21977.2 |
| glutathione synthase | EUU25_07775 | P61396 | - | 1651222 - 1652178 | 34838.9 |
| yran family protein | EUU25_07780 | A5V3S4 | - | 1652190 - 1652540 | 13337.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EUU25_07785 | Q2NAK3 | - | 1652537 - 1653370 | 29065.8 |
| penicillin-binding protein activator | EUU25_07790 | Q9ZCJ2 | + | 1653404 - 1654573 | 40778.3 |
| peptide deformylase | EUU25_07795 | Q2G491 | - | 1654590 - 1655144 | 20788.1 |
| recombination protein recr | EUU25_07800 | Q1GWJ9 | - | 1655190 - 1655786 | 21590.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.