Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | EUU25_07705 | Q5XGR8 | - | 1638121 - 1639050 | 32367.0 |
| molecular chaperone dnaj | EUU25_07710 | Q5NPS5 | - | 1639101 - 1640222 | 40455.7 |
| molecular chaperone dnak | EUU25_07715 | A5V5P9 | - | 1640293 - 1642203 | 68143.5 |
| copper chaperone pcu(a)c | EUU25_07720 | Not Available | + | 1642403 - 1642885 | 17654.5 |
| vgr related protein | EUU25_07725 | Q9I6M7 | + | 1642890 - 1643354 | 18167.9 |
| mate family efflux transporter | EUU25_07730 | Q98D15 | - | 1643343 - 1644740 | 50623.4 |
| hnh endonuclease | EUU25_07735 | Not Available | + | 1644836 - 1645276 | 16000.4 |
| nucleotide exchange factor grpe | EUU25_07740 | Q2NAJ5 | - | 1645366 - 1645944 | 20898.8 |
| heat-inducible transcriptional repressor hrca | EUU25_07745 | Q1GWJ6 | - | 1646057 - 1647100 | 36959.1 |
| ribonuclease ph | EUU25_07750 | Q2NAJ7 | + | 1647182 - 1647895 | 25542.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.