Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EUU25_07655 | A5V3X0 | - | 1625899 - 1626843 | 34068.9 |
| tyrosine recombinase | EUU25_07660 | Q2NB52 | - | 1626840 - 1627766 | 33489.4 |
| hypothetical protein | EUU25_07665 | Not Available | - | 1627767 - 1629587 | 63917.6 |
| shikimate kinase | EUU25_07670 | Q9A435 | + | 1629885 - 1630403 | 18910.0 |
| 3-dehydroquinate synthase | EUU25_07675 | Q5NPY8 | + | 1630400 - 1631500 | 39312.8 |
| sodium:proton exchanger | EUU25_07680 | P44933 | - | 1631497 - 1633278 | 63482.6 |
| iron-sulfur cluster assembly scaffold protein | EUU25_07685 | Not Available | - | 1633278 - 1633709 | 14872.8 |
| cvpa family protein | EUU25_07690 | P45108 | - | 1633709 - 1634227 | 18644.2 |
| dna repair protein rada | EUU25_07695 | Q2YMH5 | - | 1634309 - 1635673 | 47880.5 |
| patatin-like protein | EUU25_07700 | O06342 | + | 1635767 - 1638124 | 88002.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.