Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type dna transfer atpase virb11 | EUU25_07605 | Q6FYW0 | + | 1619704 - 1620696 | 35701.2 |
| Trna-arg | Not Available | Not Available | + | 1620724 - 1620800 | Not Available |
| duf1178 family protein | EUU25_07615 | Not Available | - | 1620836 - 1621324 | 17166.3 |
| glutaredoxin 3 | EUU25_07620 | P74593 | - | 1621331 - 1621600 | 9661.6 |
| comf family protein | EUU25_07625 | P31773 | - | 1621648 - 1622403 | 27570.9 |
| methyltransferase domain-containing protein | EUU25_07630 | A3KP37 | + | 1622419 - 1623276 | 31460.9 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | EUU25_07635 | P44932 | - | 1623273 - 1623683 | 15071.2 |
| flp family type ivb pilin | EUU25_07640 | Not Available | + | 1623768 - 1623941 | 6099.46 |
| flp family type ivb pilin | EUU25_07645 | Not Available | + | 1624055 - 1624213 | 5415.62 |
| lysm peptidoglycan-binding domain-containing protein | EUU25_07650 | Q9P7G4 | - | 1624307 - 1625803 | 52435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.