Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| etc complex i subunit | EUU25_07455 | Q8T1V6 | - | 1590970 - 1591248 | 10187.3 |
| atp-dependent helicase hrpb | EUU25_07460 | P37024 | - | 1591304 - 1593757 | 87625.2 |
| hypothetical protein | EUU25_07465 | Not Available | - | 1593742 - 1593930 | 6833.41 |
| polyprenyl synthetase family protein | EUU25_07470 | P44916 | - | 1593933 - 1594946 | 36364.6 |
| chorismate mutase | EUU25_07475 | Q02287 | + | 1595042 - 1595329 | 11148.3 |
| sensor histidine kinase | EUU25_07480 | Q9I0I2 | - | 1595688 - 1596998 | 48118.6 |
| response regulator transcription factor | EUU25_07485 | Q9I0I1 | - | 1597082 - 1597747 | 24638.3 |
| hypothetical protein | EUU25_07490 | Not Available | - | 1597819 - 1598115 | 11224.6 |
| duf541 domain-containing protein | EUU25_07495 | P0A3U8 | - | 1598492 - 1599310 | 29371.3 |
| d-amino-acid transaminase | EUU25_07500 | O07597 | - | 1599237 - 1600085 | 30691.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.