Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EUU25_07405 | P0AFK4 | - | 1582119 - 1582967 | 31206.3 |
| spermidine/putrescine abc transporter substrate-binding protein | EUU25_07410 | Q9I6J0 | - | 1583037 - 1584146 | 40899.7 |
| class c beta-lactamase-related serine hydrolase | EUU25_07415 | P07062 | - | 1584296 - 1585498 | 43270.5 |
| class i sam-dependent methyltransferase | EUU25_07420 | O53732 | - | 1585545 - 1586798 | 46733.7 |
| large conductance mechanosensitive channel protein mscl | EUU25_07425 | Q1GUG3 | - | 1586854 - 1587270 | 14433.0 |
| lema family protein | EUU25_07430 | A8AVK0 | + | 1587426 - 1588034 | 21765.8 |
| methanol dehydrogenase | EUU25_07435 | P55140 | + | 1588058 - 1588861 | 27716.2 |
| hypothetical protein | EUU25_07440 | Not Available | + | 1588874 - 1589563 | 25254.0 |
| nudix hydrolase | EUU25_07445 | Q8KP10 | + | 1589560 - 1590078 | 18477.2 |
| hypothetical protein | EUU25_07450 | Not Available | + | 1590378 - 1590791 | 14957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.