Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helicase | EUU25_07355 | Q10D00 | - | 1570482 - 1573181 | 97946.1 |
| nad(p)/fad-dependent oxidoreductase | EUU25_07360 | X5CY81 | - | 1573263 - 1574501 | 43865.3 |
| isovaleryl-coa dehydrogenase | EUU25_07365 | Q75IM9 | + | 1574620 - 1575774 | 41120.5 |
| hypothetical protein | EUU25_07370 | Not Available | + | 1575771 - 1576085 | 11501.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | EUU25_07375 | Q8X7G2 | + | 1576082 - 1576819 | 26277.2 |
| aspartate aminotransferase family protein | EUU25_07380 | Q9I6J2 | + | 1576991 - 1578379 | 50004.1 |
| hypothetical protein | EUU25_07385 | O08437 | + | 1578401 - 1579243 | 29568.9 |
| hypothetical protein | EUU25_07390 | Not Available | - | 1579247 - 1580143 | 32198.2 |
| abc transporter atp-binding protein | EUU25_07395 | Q9HY19 | - | 1580147 - 1581277 | 41191.7 |
| abc transporter permease | EUU25_07400 | P0AFK8 | - | 1581277 - 1582119 | 31255.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.