Sphingorhabdus lacus IMCC1753

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lacus
StrainIMCC1753

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lacus IMCC1753

Accession NumberCP035733.1

Gene Summary

Adenine Count

750717 bp

Thymine Count

750271 bp

Guanine Count

976518 bp

Cytosine Count

981137 bp

Genome Length

3458743 bp

Protein-coding Genes

3234 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cell wall hydrolaseEUU25_07305P50739-1563168 - 156415435766.9
glycosyltransferaseEUU25_07310P71054-1564492 - 156549636686.2
trna (cytidine(34)-2'-o)-methyltransferaseEUU25_07315B2IBT9+1565552 - 156601316549.9
oxygen-dependent coproporphyrinogen oxidaseEUU25_07320Q9AAT8+1566010 - 156686732130.7
gnat family n-acetyltransferaseEUU25_07325Q9KL03+1566874 - 156746122099.8
lipoyl(octanoyl) transferase lipbEUU25_07330Q1GTF8+1567458 - 156812324404.1
hypothetical proteinEUU25_07335Not Available+1568137 - 15684249897.41
nadh:flavin oxidoreductase/nadh oxidase family proteinEUU25_07340A0A482NAR8+1568421 - 156971947453.5
ferredoxin family proteinEUU25_07345Q45972-1569767 - 157010512470.3
rna-binding s4 domain-containing proteinEUU25_07350P44754-1570212 - 15704759595.06

Displaying genes 1461 – 1470 of 3284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites