Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chase2 domain-containing protein | EUU25_07255 | Q2JKD9 | + | 1552242 - 1554464 | 80739.1 |
| hypothetical protein | EUU25_07260 | Not Available | - | 1554481 - 1555005 | 18491.1 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | EUU25_07265 | P29976 | - | 1555230 - 1556603 | 50461.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | EUU25_07270 | P23136 | + | 1556893 - 1557525 | 22026.3 |
| cytochrome b/b6 | EUU25_07275 | P23134 | + | 1557540 - 1558835 | 48313.6 |
| cytochrome c1 | EUU25_07280 | P23135 | + | 1558855 - 1559700 | 30708.0 |
| Trna-gly | Not Available | Not Available | + | 1559823 - 1559896 | Not Available |
| hypothetical protein | EUU25_07290 | Not Available | + | 1560047 - 1560652 | 21759.7 |
| response regulator | EUU25_07295 | P0AA18 | + | 1560786 - 1561505 | 26574.9 |
| hamp domain-containing protein | EUU25_07300 | Q9HZ47 | + | 1561508 - 1562929 | 51807.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.