Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | EUU25_07205 | Q8UEZ6 | + | 1543628 - 1544323 | 25118.3 |
| bcr/cfla family efflux mfs transporter | EUU25_07210 | P28246 | + | 1544363 - 1545616 | 44146.0 |
| amino acid permease | EUU25_07215 | Q797A7 | - | 1545855 - 1547414 | 55373.8 |
| histidine triad nucleotide-binding protein | EUU25_07220 | P26724 | - | 1547482 - 1547859 | 13857.5 |
| phosphoribosyl-atp diphosphatase | EUU25_07225 | A5V9F7 | - | 1547863 - 1548180 | 11079.1 |
| marr family transcriptional regulator | EUU25_07230 | P31078 | - | 1548180 - 1548689 | 18636.5 |
| branched-chain amino acid aminotransferase | EUU25_07235 | O86505 | + | 1548767 - 1549855 | 39451.9 |
| Trna-gln | Not Available | Not Available | + | 1549962 - 1550036 | Not Available |
| response regulator transcription factor | EUU25_07245 | Q9F868 | + | 1550193 - 1550888 | 25947.1 |
| hypothetical protein | EUU25_07250 | Not Available | + | 1550900 - 1552198 | 46476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.