Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | EUU25_07105 | O54479 | + | 1524256 - 1526244 | 72829.4 |
| hypothetical protein | EUU25_07110 | Not Available | + | 1526328 - 1527626 | 46130.2 |
| lysr family transcriptional regulator | EUU25_07115 | P52658 | - | 1527648 - 1528439 | 27883.5 |
| co2+/mg2+ efflux protein apag | EUU25_07120 | Q98BB4 | - | 1528436 - 1528846 | 15118.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EUU25_07125 | P9WGB4 | - | 1528843 - 1530051 | 43574.1 |
| 3-isopropylmalate dehydrogenase | EUU25_07130 | Q2G4X5 | - | 1530078 - 1531124 | 37216.7 |
| dna repair protein reco | EUU25_07135 | A5VEW5 | - | 1531189 - 1531779 | 20941.5 |
| hypothetical protein | EUU25_07140 | Not Available | - | 1531831 - 1532133 | 11127.5 |
| hypothetical protein | EUU25_07145 | Q9ABK1 | + | 1532376 - 1532633 | 9711.83 |
| alpha/beta fold hydrolase | EUU25_07150 | Q54528 | - | 1532630 - 1533520 | 31499.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.