Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | EUU25_06955 | Q2G1N2 | - | 1492808 - 1493947 | 41194.9 |
| hypothetical protein | EUU25_06960 | P55626 | + | 1494347 - 1494592 | 8920.57 |
| aldehyde dehydrogenase family protein | EUU25_06965 | S0ENH1 | + | 1495175 - 1496575 | 49822.3 |
| fad-dependent oxidoreductase | EUU25_06970 | A0A075BSX9 | + | 1496642 - 1498087 | 52141.3 |
| c-type cytochrome | EUU25_06975 | Q05389 | + | 1498080 - 1498577 | 16875.9 |
| nuclear transport factor 2 family protein | EUU25_06980 | Not Available | + | 1498698 - 1499081 | 13611.2 |
| 6-hydroxypseudooxynicotine oxidase | EUU25_06985 | P16099 | + | 1499218 - 1501245 | 74429.4 |
| is21 family transposase | EUU25_06990 | Q46087 | + | 1501783 - 1503297 | 57262.2 |
| atp-binding protein | EUU25_06995 | P15026 | + | 1503294 - 1504085 | 28741.8 |
| hypothetical protein | EUU25_07000 | Not Available | + | 1504402 - 1504728 | 12002.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.