Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EUU25_06905 | A1JTG3 | - | 1477120 - 1479405 | 81943.7 |
| apc family permease | EUU25_06910 | O07576 | + | 1480031 - 1481509 | 52331.9 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_06915 | Q20772 | + | 1481586 - 1482760 | 42844.2 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_06920 | Q7CXU0 | + | 1482760 - 1483922 | 42586.5 |
| hypothetical protein | EUU25_06925 | Not Available | - | 1484436 - 1484945 | 18369.8 |
| mfs transporter | EUU25_06930 | Not Available | + | 1485595 - 1486794 | 42537.0 |
| fad-binding oxidoreductase | EUU25_06935 | P37906 | + | 1486977 - 1488407 | 52241.7 |
| fad-binding protein | EUU25_06940 | P16099 | - | 1488601 - 1490685 | 76454.3 |
| fad-binding oxidoreductase | EUU25_06945 | Q8GAI3 | - | 1490958 - 1492256 | 46275.8 |
| rida family protein | EUU25_06950 | Q10121 | - | 1492324 - 1492740 | 15180.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.