Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | EUU25_06855 | Q51697 | - | 1467200 - 1467661 | 15882.1 |
| nuclear transport factor 2 family protein | EUU25_06860 | Not Available | - | 1467911 - 1468360 | 16648.6 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EUU25_06865 | P0ABW4 | + | 1468436 - 1469053 | 21192.4 |
| tetr/acrr family transcriptional regulator | EUU25_06870 | P67443 | - | 1469901 - 1470608 | 26762.3 |
| alpha/beta fold hydrolase | EUU25_06875 | D4AV38 | - | 1470644 - 1471600 | 34257.7 |
| fad-dependent monooxygenase | EUU25_06880 | F8G0M4 | - | 1471608 - 1472771 | 42971.4 |
| isochorismatase family protein | EUU25_06885 | Q88FY5 | - | 1472768 - 1473436 | 23616.9 |
| 2,5-dihydroxypyridine 5,6-dioxygenase | EUU25_06890 | Q88FY1 | - | 1473423 - 1474499 | 39149.0 |
| n-formylmaleamate deformylase | EUU25_06895 | Q88FY3 | - | 1474519 - 1475304 | 28492.0 |
| maleate isomerase | EUU25_06900 | Q88FY4 | - | 1475309 - 1476013 | 24843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.