Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase tata/tate family subunit | EUU25_06755 | Q1GU13 | - | 1445294 - 1445515 | 7862.64 |
| smc-scp complex subunit scpb | EUU25_06760 | Q83CP9 | - | 1445584 - 1446189 | 22251.3 |
| segregation/condensation protein a | EUU25_06765 | Q83CP8 | - | 1446186 - 1446965 | 29321.8 |
| glycoside hydrolase family 3 protein | EUU25_06770 | Q2KXM7 | - | 1446962 - 1448011 | 37547.1 |
| spor domain-containing protein | EUU25_06775 | Not Available | - | 1448166 - 1448843 | 22923.9 |
| arginine--trna ligase | EUU25_06780 | Q2G9D9 | - | 1448869 - 1450590 | 62372.4 |
| hypothetical protein | EUU25_06785 | Not Available | - | 1450617 - 1451267 | 22541.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EUU25_06790 | B4R8T7 | + | 1451403 - 1452368 | 34433.0 |
| homoserine kinase | EUU25_06795 | O69015 | + | 1452370 - 1453362 | 36739.6 |
| ribonuclease hi | EUU25_06800 | Q2ND39 | + | 1453349 - 1453789 | 16332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.