Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | EUU25_06605 | A5V9T6 | - | 1413616 - 1414974 | 48491.4 |
| glycine cleavage system protein gcvh | EUU25_06610 | Q89I87 | - | 1415017 - 1415388 | 12969.7 |
| glycine cleavage system aminomethyltransferase gcvt | EUU25_06615 | O14110 | - | 1415385 - 1416524 | 40895.1 |
| nad-dependent epimerase/dehydratase family protein | EUU25_06620 | A2QWW3 | - | 1416781 - 1417431 | 23119.0 |
| deoxyguanosinetriphosphate triphosphohydrolase | EUU25_06625 | Q9RNN5 | - | 1417436 - 1418581 | 43164.9 |
| hypothetical protein | EUU25_06630 | Not Available | - | 1418621 - 1420510 | 66328.3 |
| cell division protein ftsz | EUU25_06635 | V6F5E5 | - | 1420625 - 1422118 | 51847.9 |
| cell division protein ftsa | EUU25_06640 | O30994 | - | 1422224 - 1423489 | 44358.3 |
| ftsq-type potra domain-containing protein | EUU25_06645 | Q2G991 | - | 1423486 - 1424400 | 33469.1 |
| d-alanine--d-alanine ligase | EUU25_06650 | Q1GRY2 | - | 1424400 - 1425323 | 33265.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.