Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | EUU25_06505 | O34421 | - | 1382886 - 1384040 | 41678.0 |
| efflux rnd transporter periplasmic adaptor subunit | EUU25_06510 | C9XVZ5 | + | 1384213 - 1385259 | 36262.3 |
| efflux rnd transporter permease subunit | EUU25_06515 | P24181 | + | 1385266 - 1388370 | 110491.0 |
| mfs transporter | EUU25_06520 | O14091 | - | 1388362 - 1389849 | 53206.9 |
| laci family transcriptional regulator | EUU25_06525 | P44329 | - | 1389962 - 1390987 | 37138.9 |
| tonb-dependent receptor | EUU25_06530 | A5F9G0 | + | 1391260 - 1393983 | 97722.2 |
| tryptophan 7-halogenase | EUU25_06535 | P95480 | + | 1394058 - 1395581 | 56056.6 |
| alpha-amylase | EUU25_06540 | Q05884 | + | 1395578 - 1397380 | 65647.4 |
| alpha-glucosidase | EUU25_06545 | Q9Z3R8 | + | 1397365 - 1399005 | 61461.2 |
| glycoside hydrolase family 97 protein | EUU25_06550 | G8JZS4 | + | 1399026 - 1401086 | 76753.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.