Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspg | EUU25_06405 | Q00514 | - | 1355717 - 1356193 | 17319.8 |
| type ii secretion system protein gspf | EUU25_06410 | P31705 | - | 1356196 - 1357410 | 44388.1 |
| type ii secretion system protein gspe | EUU25_06415 | Q00512 | - | 1357403 - 1358923 | 54687.0 |
| type ii secretion system protein gspd | EUU25_06420 | P35818 | - | 1358956 - 1361145 | 76538.8 |
| type ii secretion system protein c | EUU25_06425 | P31699 | - | 1361142 - 1362035 | 30947.0 |
| tonb-dependent receptor | EUU25_06430 | Not Available | - | 1362162 - 1364882 | 99527.2 |
| hypothetical protein | EUU25_06435 | Not Available | - | 1364961 - 1366532 | 53162.9 |
| tetratricopeptide repeat protein | EUU25_06440 | Not Available | - | 1366821 - 1367201 | 13324.0 |
| tonb-dependent receptor | EUU25_06445 | P13036 | + | 1367426 - 1369639 | 80300.5 |
| alkaline phosphatase family protein | EUU25_06450 | Q9Y6X5 | + | 1369639 - 1370973 | 47274.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.