Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_06355 | Not Available | + | 1348496 - 1348705 | 7584.15 |
| duf4102 domain-containing protein | EUU25_06360 | P32053 | - | 1348713 - 1350008 | 47931.9 |
| prepilin peptidase | EUU25_06365 | P72640 | - | 1350237 - 1350947 | 25347.6 |
| type ii secretion system protein n | EUU25_06370 | Not Available | - | 1351001 - 1351699 | 24812.5 |
| hypothetical protein | EUU25_06375 | P25061 | - | 1351696 - 1352175 | 16815.3 |
| hypothetical protein | EUU25_06380 | Not Available | - | 1352172 - 1353257 | 38473.6 |
| general secretion pathway protein gspk | EUU25_06385 | P31706 | - | 1353254 - 1354240 | 34941.0 |
| type ii secretion system protein gspj | EUU25_06390 | Q00517 | - | 1354237 - 1354881 | 23231.7 |
| type ii secretion system protein gspi | EUU25_06395 | P45775 | - | 1354878 - 1355210 | 11605.9 |
| type ii secretion system protein gsph | EUU25_06400 | Q00515 | - | 1355251 - 1355766 | 18519.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.