Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoylputrescine amidase | EUU25_05955 | Q8VYF5 | + | 1271957 - 1272826 | 31961.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EUU25_05960 | P72736 | + | 1272813 - 1273334 | 19275.3 |
| Trna-lys | Not Available | Not Available | + | 1273385 - 1273460 | Not Available |
| mfs transporter | EUU25_05970 | O31561 | - | 1273755 - 1275086 | 47134.1 |
| transmembrane anchor protein | EUU25_05975 | Not Available | - | 1275098 - 1275742 | 22159.9 |
| hupe/urej family protein | EUU25_05980 | Not Available | - | 1275755 - 1276462 | 25794.2 |
| cusa/czca family heavy metal efflux rnd transporter | EUU25_05985 | P94177 | - | 1276471 - 1279644 | 113148.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | EUU25_05990 | P94176 | - | 1279659 - 1280903 | 44919.6 |
| tolc family protein | EUU25_05995 | P13509 | - | 1280900 - 1282138 | 44193.5 |
| hypothetical protein | EUU25_06000 | Not Available | - | 1282204 - 1282524 | 11008.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.