Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | EUU25_05905 | Q2NAR9 | + | 1263890 - 1265203 | 46916.9 |
| zinc ribbon domain-containing protein | EUU25_05910 | Not Available | + | 1265251 - 1265601 | 12107.2 |
| transcriptional repressor nrdr | EUU25_05915 | A5V5D2 | + | 1265602 - 1266063 | 17373.6 |
| rna methyltransferase | EUU25_05920 | A7MGX5 | + | 1266060 - 1266782 | 25948.2 |
| hypothetical protein | EUU25_05925 | Not Available | + | 1266848 - 1267093 | 8567.32 |
| chorismate mutase | EUU25_05930 | Q51507 | - | 1267133 - 1267450 | 11770.0 |
| 30s ribosomal protein s4 | EUU25_05935 | A5V5E0 | + | 1267630 - 1268244 | 23232.2 |
| m28 family peptidase | EUU25_05940 | Q7M758 | + | 1268356 - 1270035 | 60172.6 |
| agmatine deiminase family protein | EUU25_05945 | Q2SRJ6 | + | 1270042 - 1271022 | 35099.1 |
| methyltransferase | EUU25_05950 | Not Available | + | 1271087 - 1271950 | 32132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.