Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | EUU25_05805 | Q2G9Y4 | - | 1246441 - 1246863 | 15438.4 |
| hypothetical protein | EUU25_05810 | Not Available | - | 1246955 - 1247464 | 17215.1 |
| dna polymerase iii subunit chi | EUU25_05815 | Not Available | - | 1247504 - 1247941 | 16143.8 |
| leucyl aminopeptidase | EUU25_05820 | Q9A7M9 | - | 1247954 - 1249411 | 51121.4 |
| lps-assembly protein lptd | EUU25_05825 | Q3JAF0 | + | 1249591 - 1251822 | 81774.2 |
| peptidylprolyl isomerase | EUU25_05830 | Q145L3 | + | 1251925 - 1253265 | 48812.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EUU25_05835 | Q5NMX3 | + | 1253265 - 1254278 | 35725.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EUU25_05840 | Q2N8W9 | + | 1254275 - 1255099 | 29377.9 |
| hydrolase | EUU25_05845 | P06621 | + | 1255367 - 1256575 | 42141.5 |
| arginine n-succinyltransferase | EUU25_05850 | A8AHD9 | + | 1256572 - 1257603 | 37767.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.