Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | EUU25_05755 | Q9K0C5 | + | 1236460 - 1236948 | 17806.0 |
| polyphosphate kinase | EUU25_05760 | Q9HYF1 | - | 1237156 - 1237935 | 30081.5 |
| aspartate--trna ligase | EUU25_05765 | Q2G8P1 | - | 1238028 - 1239812 | 66668.5 |
| ribonuclease d | EUU25_05770 | D4Z694 | + | 1239908 - 1241092 | 44376.6 |
| hypothetical protein | EUU25_05775 | Not Available | + | 1241089 - 1241400 | 10850.2 |
| atpase | EUU25_05780 | Not Available | - | 1241397 - 1241981 | 20775.0 |
| heavy-metal-associated domain-containing protein | EUU25_05785 | Not Available | - | 1242000 - 1243073 | 38353.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | EUU25_05790 | Q1GSA2 | + | 1243135 - 1244241 | 38377.9 |
| phosphoribosylglycinamide formyltransferase | EUU25_05795 | P21872 | + | 1244260 - 1245210 | 34604.2 |
| hypothetical protein | EUU25_05800 | Not Available | + | 1245283 - 1246266 | 36523.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.