Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa ester lyase | EUU25_05605 | A4WNM9 | - | 1204313 - 1205140 | 28990.7 |
| spfh/band 7/phb domain protein | EUU25_05610 | P0AA55 | + | 1205282 - 1206196 | 33520.6 |
| nfed family protein | EUU25_05615 | P0AAS3 | + | 1206235 - 1206687 | 15980.5 |
| cupin domain-containing protein | EUU25_05620 | Q53867 | - | 1206711 - 1207031 | 11842.7 |
| wyl domain-containing protein | EUU25_05625 | O34920 | - | 1207043 - 1208011 | 35261.4 |
| hypothetical protein | EUU25_05630 | Not Available | + | 1208185 - 1208688 | 18848.9 |
| hypothetical protein | EUU25_05635 | Not Available | - | 1208709 - 1209161 | 16891.0 |
| phosphoenolpyruvate carboxykinase | EUU25_05640 | Q2G480 | - | 1209200 - 1210801 | 57740.7 |
| response regulator transcription factor | EUU25_05645 | P50350 | + | 1210949 - 1211656 | 26624.9 |
| hamp domain-containing protein | EUU25_05650 | Q07737 | + | 1211625 - 1213205 | 57471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.