Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | EUU25_05555 | A9CJC9 | - | 1192613 - 1194010 | 52442.4 |
| metal-dependent hydrolase | EUU25_05560 | O31583 | - | 1194007 - 1194969 | 36229.5 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | EUU25_05565 | O53181 | - | 1195029 - 1196063 | 37462.5 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | EUU25_05570 | O53182 | - | 1196060 - 1197931 | 66393.3 |
| alpha/beta hydrolase | EUU25_05575 | P71668 | + | 1198079 - 1199038 | 34232.8 |
| rna pyrophosphohydrolase | EUU25_05580 | Q1GSV9 | + | 1199035 - 1199520 | 18609.1 |
| tetratricopeptide repeat protein | EUU25_05585 | Not Available | - | 1199537 - 1200067 | 18577.3 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EUU25_05590 | P72943 | - | 1200100 - 1201281 | 42254.7 |
| imp dehydrogenase | EUU25_05595 | Q9KH33 | - | 1201285 - 1202745 | 51315.1 |
| m28 family peptidase | EUU25_05600 | C5DDZ2 | - | 1202812 - 1204296 | 52801.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.