Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase catalytic subunit | EUU25_05505 | A5V3V4 | + | 1183137 - 1184132 | 36137.6 |
| dihydroorotase | EUU25_05510 | Q39US3 | + | 1184129 - 1185352 | 42518.4 |
| tetratricopeptide repeat protein | EUU25_05515 | Not Available | - | 1185394 - 1186746 | 46803.3 |
| hypothetical protein | EUU25_05520 | Not Available | - | 1186778 - 1187395 | 22420.6 |
| para family protein | EUU25_05525 | Q72H90 | - | 1187419 - 1188138 | 25226.5 |
| hypothetical protein | EUU25_05530 | Q9JZ25 | + | 1188415 - 1189422 | 34910.7 |
| hypothetical protein | EUU25_05535 | Not Available | - | 1189419 - 1189946 | 18486.6 |
| phosphoribosyl-amp cyclohydrolase | EUU25_05540 | A5V3S9 | - | 1189943 - 1190302 | 13029.5 |
| amidophosphoribosyltransferase | EUU25_05545 | P77935 | + | 1190433 - 1191890 | 52582.9 |
| sdr family nad(p)-dependent oxidoreductase | EUU25_05550 | P31808 | + | 1191894 - 1192604 | 24443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.