Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUU25_05455 | Not Available | - | 1174484 - 1174708 | 7889.92 |
| hypothetical protein | EUU25_05460 | Not Available | - | 1174705 - 1175301 | 21901.0 |
| hypothetical protein | EUU25_05465 | Not Available | + | 1175607 - 1176257 | 22378.9 |
| hypothetical protein | EUU25_05470 | Not Available | + | 1176423 - 1176941 | 18899.7 |
| hypothetical protein | EUU25_05475 | Not Available | + | 1177050 - 1177907 | 31149.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | EUU25_05480 | Q2G4F6 | - | 1177910 - 1179385 | 54051.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | EUU25_05485 | Q1GUW3 | - | 1179602 - 1181086 | 51878.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | EUU25_05490 | Q2G4F4 | - | 1181086 - 1181373 | 10291.4 |
| duf3089 domain-containing protein | EUU25_05495 | Not Available | + | 1181518 - 1182639 | 40881.0 |
| holliday junction resolvase ruvx | EUU25_05500 | Q1GUM9 | + | 1182636 - 1183094 | 16156.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.