Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lacus IMCC1753
Accession NumberCP035733.1
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | EUU25_05055 | B7UM74 | - | 1091001 - 1093061 | 74575.7 |
| succinate dehydrogenase assembly factor 2 | EUU25_05060 | Q4UV74 | + | 1093122 - 1093400 | 10564.5 |
| transcription-repair coupling factor | EUU25_05065 | Q1RI82 | + | 1093550 - 1097035 | 127543.0 |
| ggdef domain-containing protein | EUU25_05070 | Q9I310 | - | 1097262 - 1098557 | 47121.4 |
| gtp 3',8-cyclase moaa | EUU25_05075 | Q92PB4 | + | 1098640 - 1099635 | 36732.6 |
| nad kinase | EUU25_05080 | A5V6G8 | + | 1099632 - 1100408 | 28383.5 |
| Trna-asn | Not Available | Not Available | + | 1100482 - 1100556 | Not Available |
| sulfite exporter taue/safe family protein | EUU25_05090 | P55478 | - | 1100564 - 1101310 | 26221.7 |
| preprotein translocase subunit seca | EUU25_05095 | Q1GS43 | - | 1101433 - 1104162 | 101945.0 |
| hypothetical protein | EUU25_05100 | Not Available | - | 1104261 - 1104542 | 9945.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.