Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Roseibium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Roseibium |
| Species | Roseibium alexandrii |
| Strain | DFL-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Roseibium alexandrii DFL-11
Accession NumberCM011002.1
Gene Summary
Adenine Count
1143736 bp
Thymine Count
1166550 bp
Guanine Count
1498323 bp
Cytosine Count
1490641 bp
Genome Length
5300354 bp
Protein-coding Genes
4815 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SADFL11_3124 | Q8RHX2 | - | 4314892 - 4315728 | 30561.6 |
| protocatechuate 3,4-dioxygenase, alpha subunit | SADFL11_3997 | P20371 | - | 4315736 - 4316356 | 22826.8 |
| protocatechuate 3,4-dioxygenase, beta subunit | SADFL11_2433 | P00437 | - | 4316359 - 4317084 | 27206.1 |
| 4-carboxymuconolactone decarboxylase | SADFL11_4456 | P20370 | - | 4317108 - 4317497 | 14114.6 |
| putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily) | SADFL11_4244 | P00632 | - | 4317684 - 4318280 | 21911.2 |
| 4-hydroxybenzoate 3-monooxygenase | SADFL11_767 | P20586 | - | 4318280 - 4319449 | 43871.0 |
| pca operon transcription factor pcaq | SADFL11_1409 | P0A4T6 | + | 4319544 - 4320464 | 33647.9 |
| thiamine pyrophosphate-requiring enzyme | SADFL11_3211 | Q9HUI8 | + | 4320461 - 4322218 | 62479.0 |
| response regulator | SADFL11_1962 | P0A2D6 | + | 4322430 - 4323227 | 29467.3 |
| hypothetical protein | SADFL11_1036 | Not Available | + | 4323433 - 4324248 | 29953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.