Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas mediterranea |
| Strain | 9.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas mediterranea 9.1
Accession NumberLT629790.1
Gene Summary
Adenine Count
1229552 bp
Thymine Count
1232435 bp
Guanine Count
1942212 bp
Cytosine Count
1941936 bp
Genome Length
6346235 bp
Protein-coding Genes
5363 genes
Non-Coding Genes
241 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05216476_4986 | P20371 | - | 5381078 - 5381644 | 20624.3 |
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN05216476_4987 | P15110 | - | 5381646 - 5382350 | 26324.9 |
| 3-oxoadipyl-coa thiolase | SAMN05216476_4988 | Q51956 | - | 5382388 - 5383590 | 41606.3 |
| glutaconate coa-transferase subunit b | SAMN05216476_4989 | Q8VPF2 | - | 5383590 - 5384369 | 27168.6 |
| glutaconate coa-transferase subunit a | SAMN05216476_4990 | Q8VPF3 | - | 5384366 - 5385226 | 31077.1 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN05216476_4992 | Q51955 | - | 5385513 - 5386859 | 47322.9 |
| transcriptional regulator, iclr family | SAMN05216476_4993 | Q52154 | - | 5386990 - 5387889 | 32606.4 |
| hypothetical protein | SAMN05216476_4994 | Not Available | + | 5388395 - 5388595 | 8041.41 |
| low-affinity inorganic phosphate transporter | SAMN05216476_4995 | P0AFJ9 | + | 5388948 - 5390423 | 52807.0 |
| hypothetical protein | SAMN05216476_4998 | Not Available | - | 5390676 - 5390792 | 4490.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.



