Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Paracidovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Paracidovorax |
| Species | Paracidovorax citrulli |
| Strain | M6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | plant tissues; terrestrial/aquatic environments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | melon seedlings; Plant |
Genome Summary
Acidovorax citrulli M6
Accession NumberCP029373.1
Gene Summary
Adenine Count
754168 bp
Thymine Count
752980 bp
Guanine Count
1668629 bp
Cytosine Count
1670689 bp
Genome Length
4846466 bp
Protein-coding Genes
4116 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 60 kda chaperonin | APS58_2648 | A1TKQ5 | - | 2917371 - 2919008 | 57011.0 |
| 10 kda chaperonin 5 | APS58_2649 | A1TKQ6 | - | 2919067 - 2919357 | 10347.5 |
| hypothetical protein | APS58_2651 | Not Available | + | 2920013 - 2920384 | 13682.2 |
| mannose-1-phosphate guanylyltransferase 1 | APS58_2652 | B0RVK6 | + | 2920381 - 2921898 | 54754.5 |
| udp-n-acetyl-d-glucosamine 6-dehydrogenase | APS58_2653 | Q04972 | + | 2921935 - 2923233 | 47124.5 |
| udp-n-acetyl-2-amino-2-deoxy-d-glucuronate oxidase | APS58_2654 | G3XD23 | + | 2923256 - 2924194 | 35566.4 |
| udp-2-acetamido-3-amino-2, 3-dideoxy-d-glucuronate n-acetyltransferase | APS58_2655 | G3XD01 | + | 2924261 - 2924848 | 21016.1 |
| udp-2-acetamido-2-deoxy-3-oxo-d-glucuronate aminotransferase | APS58_2656 | Q9HZ76 | + | 2924870 - 2925649 | 28025.7 |
| udp-2,3-diacetamido-2,3-dideoxy-d-glucuronate 2-epimerase | APS58_2657 | G3XD61 | + | 2926106 - 2927050 | 34501.5 |
| polysialic acid transport protein kpsm | APS58_2658 | Q48475 | + | 2927047 - 2927829 | 29138.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.