Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | RC54_02430 | P39853 | + | 538589 - 540577 | 73499.3 |
| phosphomannomutase/phosphoglucomutase | RC54_02435 | P40390 | + | 540604 - 541980 | 49892.9 |
| lipopolysaccharide heptosyltransferase i | RC54_02440 | P26469 | + | 542038 - 543015 | 35584.3 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | RC54_02445 | Not Available | + | 543192 - 544061 | 32819.5 |
| 3-deoxy-d-manno-octulosonic acid transferase | RC54_02450 | Q45374 | + | 544063 - 545337 | 47330.9 |
| nucleoside-diphosphate sugar epimerase | RC54_02455 | Q56623 | - | 545334 - 546296 | 34146.4 |
| 16s ribosomal rna | Not Available | Not Available | + | 547007 - 548547 | Not Available |
| Trna-ile | Not Available | Not Available | + | 548664 - 548740 | Not Available |
| Trna-ala | Not Available | Not Available | + | 548748 - 548823 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 549104 - 551993 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.