Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | RC54_01880 | P02942 | + | 418179 - 419834 | 58250.2 |
| hypothetical protein | RC54_01885 | Not Available | + | 419853 - 420089 | 8845.58 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | RC54_01890 | P37773 | + | 420207 - 421589 | 49154.0 |
| esterase | RC54_01895 | P0A8Z9 | + | 421586 - 422176 | 21196.5 |
| chorismate lyase | RC54_01900 | Q0K6Y1 | + | 422176 - 422790 | 22571.9 |
| rnb domain-containing ribonuclease | RC54_01905 | P73177 | + | 422797 - 424890 | 76454.9 |
| energy transducer tonb | RC54_01910 | Not Available | + | 424940 - 425830 | 32406.7 |
| shikimate dehydrogenase | RC54_01915 | A6T2A5 | + | 425906 - 426721 | 29150.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | RC54_01920 | A6T2A4 | + | 426858 - 427565 | 27310.2 |
| magnesium and cobalt transport protein cora | RC54_01925 | Q8ZAG5 | + | 427739 - 428704 | 36534.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.