Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | RC54_06575 | Q9HX48 | - | 1485007 - 1485567 | 20896.4 |
| isocitrate dehydrogenase (nadp(+)) | RC54_06580 | Q02NB5 | + | 1485806 - 1487062 | 46016.9 |
| cold-shock protein | RC54_06585 | P72366 | - | 1487226 - 1487432 | 7354.6 |
| atp-dependent clp protease adapter clps | RC54_06590 | A4G7T9 | + | 1487771 - 1488085 | 11758.3 |
| atp-dependent clp protease atp-binding subunit clpa | RC54_06595 | P0ABI1 | + | 1488082 - 1490385 | 84731.8 |
| peptidase m48 | RC54_06600 | Q9KQ40 | - | 1490536 - 1491639 | 39529.7 |
| dutp diphosphatase | RC54_06605 | A6SW68 | - | 1491639 - 1492088 | 15828.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | RC54_06610 | Q9KVD1 | - | 1492187 - 1493383 | 42858.8 |
| lipoprotein signal peptidase | RC54_06615 | A6SW70 | - | 1493431 - 1493946 | 18741.2 |
| isoleucine--trna ligase | RC54_06620 | A4G3E6 | - | 1494022 - 1496916 | 107525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.