Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RC54_04575 | P52661 | - | 1009752 - 1010693 | 34712.7 |
| porin | RC54_04580 | Q04064 | + | 1011015 - 1012157 | 40038.7 |
| smp-30/gluconolactonase/lre family protein | RC54_04585 | Q1JUP5 | + | 1012320 - 1013201 | 31840.6 |
| iclr family transcriptional regulator | RC54_04590 | P77300 | - | 1013285 - 1014136 | 31716.2 |
| l-fuconate dehydratase | RC54_04595 | Q0QWS4 | + | 1014508 - 1015785 | 47715.6 |
| short-chain dehydrogenase | RC54_04600 | Q9X248 | + | 1015829 - 1016605 | 27868.3 |
| l-rhamnose mutarotase | RC54_04605 | Q8P3K1 | + | 1016613 - 1016957 | 13280.0 |
| sugar abc transporter atp-binding protein | RC54_04610 | A0B297 | + | 1017191 - 1018738 | 56407.6 |
| abc transporter permease | RC54_04615 | P0AGI3 | + | 1018806 - 1019846 | 36260.4 |
| bmp family abc transporter substrate-binding protein | RC54_04620 | P39265 | + | 1019948 - 1020886 | 33231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.