Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | RC54_01930 | Not Available | + | 428842 - 429309 | 15956.6 |
| anhydro-n-acetylmuramic acid kinase | RC54_01935 | Q475S7 | - | 429442 - 430569 | 39355.0 |
| m23 family peptidase | RC54_01940 | P0AFT0 | - | 430650 - 432047 | 50621.4 |
| tyrosine--trna ligase | RC54_01945 | Q39JJ6 | + | 432296 - 433564 | 46222.8 |
| d-tyrosyl-trna(tyr) deacylase | RC54_01950 | A4G1U1 | + | 433577 - 434068 | 17522.2 |
| ybhb/ybcl family raf kinase inhibitor-like protein | RC54_01955 | P12994 | + | 434155 - 434802 | 23297.4 |
| histidine phosphatase family protein | RC54_01960 | Q9SCS3 | + | 434812 - 435456 | 24250.5 |
| xre family transcriptional regulator | RC54_01965 | Q8FHF3 | + | 435596 - 435865 | 9955.98 |
| type ii toxin-antitoxin system hipa family toxin | RC54_01970 | P23874 | + | 435859 - 437226 | 50206.8 |
| trna dihydrouridine synthase dusb | RC54_01975 | Q9HUW1 | + | 437390 - 438418 | 37732.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.