Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid abc transporter substrate-binding protein | RC54_22525 | Q06758 | + | 5052512 - 5053318 | 28787.6 |
| amino acid abc transporter permease | RC54_22530 | P54536 | + | 5053455 - 5054198 | 27522.4 |
| aminoacetone oxidase family fad-binding enzyme | RC54_22535 | Q795R8 | + | 5054286 - 5055584 | 46528.0 |
| slyx protein | RC54_22540 | Not Available | + | 5055581 - 5055790 | 8202.7 |
| dna polymerase iv | RC54_22545 | Q0A4X2 | + | 5055822 - 5056976 | 42088.0 |
| error-prone dna polymerase | RC54_22550 | Q7WHW8 | - | 5056981 - 5060148 | 117338.0 |
| dna polymerase y family protein | RC54_22555 | Q9A3J2 | - | 5060166 - 5061641 | 54749.3 |
| cell division protein | RC54_22560 | Not Available | - | 5061571 - 5062272 | 24834.4 |
| hypothetical protein | RC54_22565 | Not Available | - | 5062368 - 5063060 | 24331.8 |
| fadr family transcriptional regulator | RC54_22570 | O07007 | + | 5063499 - 5064254 | 27583.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.