Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | RC54_22325 | O67422 | - | 5009557 - 5010399 | 30766.4 |
| phage holin family protein | RC54_22330 | Q53868 | - | 5010396 - 5010749 | 12425.9 |
| adenosylhomocysteinase | RC54_22335 | A6T2Y9 | - | 5010900 - 5012327 | 52576.9 |
| methionine adenosyltransferase | RC54_22340 | A6T2Z1 | - | 5012610 - 5013773 | 42131.0 |
| lipid a biosynthesis acyltransferase | RC54_22345 | P0ACV1 | + | 5013964 - 5014809 | 30779.9 |
| lipid a biosynthesis acyltransferase | RC54_22350 | P0ACV1 | + | 5014806 - 5015690 | 33956.8 |
| diaminopimelate epimerase | RC54_22355 | A4G980 | + | 5015739 - 5016602 | 31057.3 |
| sel1 repeat family protein | RC54_22360 | Not Available | - | 5016744 - 5018348 | 58498.6 |
| porin | RC54_22365 | P24305 | + | 5018716 - 5019978 | 43299.6 |
| duf484 domain-containing protein | RC54_22370 | P55886 | + | 5020201 - 5020869 | 24881.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.