Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein hcp | RC54_21175 | Q9I747 | - | 4769687 - 4770178 | 17899.2 |
| type vi secretion system contractile sheath large subunit | RC54_21180 | Q9I748 | - | 4770213 - 4771706 | 54678.4 |
| type vi secretion system contractile sheath small subunit | RC54_21185 | Q9I749 | - | 4771719 - 4772219 | 18932.8 |
| hypothetical protein | RC54_21190 | Not Available | - | 4772310 - 4772930 | 21376.4 |
| type vi secretion system lipoprotein tssj | RC54_21195 | Not Available | + | 4773302 - 4773931 | 22400.2 |
| type vi secretion system baseplate subunit tssk | RC54_21200 | Q9I753 | + | 4773994 - 4775340 | 50191.0 |
| dotu family type iv/vi secretion system protein | RC54_21205 | Not Available | + | 4775337 - 4776116 | 28763.8 |
| type vi secretion system tip protein vgrg | RC54_21210 | Q9I737 | + | 4776147 - 4778861 | 97494.4 |
| hydroxyethylthiazole kinase | RC54_21215 | Not Available | + | 4778871 - 4781057 | 81972.1 |
| hypothetical protein | RC54_21220 | Not Available | + | 4781047 - 4781520 | 17703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.