Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter atp-binding protein | RC54_20825 | P0A9V3 | + | 4690300 - 4691049 | 27511.5 |
| rna polymerase factor sigma-54 | RC54_20830 | P28615 | + | 4691111 - 4692601 | 55143.8 |
| ribosomal subunit interface protein | RC54_20835 | P28613 | + | 4692756 - 4693118 | 13570.3 |
| monothiol glutaredoxin, grx4 family | RC54_20840 | P73056 | + | 4693364 - 4693675 | 11272.6 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | RC54_20845 | Q9JXP4 | + | 4693702 - 4694304 | 21808.8 |
| nad(p)-dependent oxidoreductase | RC54_20850 | A7AZH2 | - | 4694383 - 4695141 | 26925.6 |
| alpha-ketoglutarate dehydrogenase | RC54_20855 | Q59637 | - | 4695307 - 4697988 | 98688.7 |
| lrp/asnc family transcriptional regulator | RC54_20860 | P42179 | + | 4698308 - 4698787 | 17929.0 |
| response regulator | RC54_20865 | P21866 | - | 4698800 - 4699258 | 16663.0 |
| arac family transcriptional regulator | RC54_20870 | Q46866 | - | 4699391 - 4700257 | 33068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.