Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nlpd lipoprotein | RC54_20075 | Q46798 | - | 4517169 - 4517927 | 27088.3 |
| pyrroline-5-carboxylate reductase | RC54_20080 | P22008 | - | 4517927 - 4518739 | 28037.8 |
| yggs family pyridoxal phosphate-dependent enzyme | RC54_20085 | P24562 | - | 4518803 - 4519504 | 24848.0 |
| twitching motility protein pilt | RC54_20090 | Q06581 | + | 4519577 - 4520605 | 36184.1 |
| glutathione peroxidase | RC54_20095 | O59858 | + | 4520645 - 4521181 | 19972.0 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | RC54_20100 | O69052 | - | 4521197 - 4522093 | 32675.6 |
| ggdef-domain containing protein | RC54_20105 | Q9I310 | - | 4522090 - 4524375 | 84920.5 |
| sigma-54-dependent fis family transcriptional regulator | RC54_20110 | P28614 | - | 4524656 - 4525891 | 44787.1 |
| lysr family transcriptional regulator | RC54_20115 | Q04778 | + | 4525940 - 4526842 | 33402.7 |
| nad(p)-dependent oxidoreductase | RC54_20120 | A0A1L5BU05 | - | 4526959 - 4527759 | 28532.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.