Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum rubrisubalbicans B579
Accession NumberCP024996.1
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin | RC54_19825 | Q04064 | - | 4463374 - 4464516 | 40997.0 |
| sugar phosphate isomerase/epimerase | RC54_19830 | Q88JU3 | - | 4464807 - 4465679 | 32306.9 |
| shikimate dehydrogenase | RC54_19835 | Q39VU8 | - | 4465676 - 4466521 | 30495.2 |
| 4-hydroxyphenylpyruvate dioxygenase | RC54_19840 | O06695 | - | 4466526 - 4467407 | 32830.1 |
| iclr family transcriptional regulator | RC54_19845 | Q52154 | + | 4467537 - 4468319 | 28691.9 |
| 4-hydroxyphenylpyruvate dioxygenase | RC54_19850 | O83046 | + | 4468336 - 4469163 | 29782.9 |
| oxygen-insensitive nad(p)h nitroreductase | RC54_19855 | Q01234 | - | 4469185 - 4469838 | 23558.2 |
| lysr family transcriptional regulator | RC54_19860 | P76250 | + | 4470035 - 4470940 | 33507.1 |
| eama/rhat family transporter | RC54_19865 | O34416 | - | 4470957 - 4471925 | 33917.9 |
| dihydropyrimidinase | RC54_19870 | Q45515 | - | 4472235 - 4473659 | 52067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.